Isolation and characterization of polymorphic microsatellite loci in the lance‐tailed manakin (Chiroxiphia lanceolata)

Eight microsatellite loci were isolated from the lance‐tailed manakin (Chiroxiphia lanceolata), a polygynous lek‐breeding bird from Central America. Five of these loci were polymorphic (two to seven alleles per locus), with observed levels of heterozygosity ranging from 0.100 to 0.860 (n = 50 individuals). These variable loci provide a valuable tool for assessing patterns of parentage and relatedness within lance‐tailed manakin social groups.     

Survey‐gap analysis in expeditionary research: where do we go from here?

Research expeditions into remote areas to collect biological specimens provide vital information for understanding biodiversity. However, major expeditions to little‐known areas are expensive and time consuming, time is short, and well‐trained people are difficult to find. In addition, processing the collections and obtaining accurate identifications takes time and money. In order to get the maximum return for the investment, we need to determine the location of the collecting expeditions carefully. In this study we used environmental variables and information on existing collecting localities to help determine the sites of future expeditions. Results from other studies were used to aid in the selection of the environmental variables, including variables relating to temperature, rainfall, lithology and distance between sites. A survey gap analysis tool based on ‘ED complementarity’ was employed to select the sites that would most likely contribute the most new taxa. The tool does not evaluate how well collected a previously visited site survey site might be; however, collecting effort was estimated based on species accumulation curves. We used the number of collections and/or number of species at each collecting site to eliminate those we deemed poorly collected. Plants, birds, and insects from Guyana were examined using the survey gap analysis tool, and sites for future collecting expeditions were determined. The south‐east section of Guyana had virtually no collecting information available. It has been inaccessible for many years for political reasons and as a result, eight of the first ten sites selected were in that area. In order to evaluate the remainder of the country, and because there are no immediate plans by the Government of Guyana to open that area to exploration, that section of the country was not included in the remainder of the study. The range of the ED complementarity values dropped sharply after the first ten sites were selected. For plants, the group for which we had the most records, areas selected included several localities in the Pakaraima Mountains, the border with the south‐east, and one site in the north‐west. For birds, a moderately collected group, the strongest need was in the north‐west followed by the east. Insects had the smallest data set and the largest range of ED complementarity values; the results gave strong emphasis to the southern parts of the country, but most of the locations appeared to be equidistant from one another, most likely because of insufficient data. Results demonstrate that the use of a survey gap analysis tool designed to solve a locational problem using continuous environmental data can help maximize our resources for gathering new information on biodiversity. © 2005 The Linnean Society of London, Biological Journal of the Linnean Society, 2005, 85 , 549–567.     

American Kestrel reproduction: evidence for the selection hypothesis and the role of dispersal

Many hypotheses attempt to explain why younger, less experienced birds have a relatively low reproductive output. We evaluated reproductive patterns of marked American Kestrels Falco sparverius nesting in boxes in southwestern Idaho from 1992 to 2006 to test predictions of these hypotheses. Results were consistent with the selection (differential mortality) hypothesis and did not support the constraint, restraint or recruitment hypotheses. Most known-age Kestrels nested in their first year of life, and there was no apparent short-term or long-term reproductive advantage to delayed breeding. The number of years that Kestrels nested in study area boxes ranged from 1 to 6 years, with most Kestrels nesting in only 1 year. Reproductive rates were higher for birds with at least 1 year of nesting experience than for birds nesting in boxes for the first time. After 2 years of nesting, reproductive rates levelled off; there was no evidence for additional improvement or for senescence. Differences in reproductive output with experience/age were due to variation among and not within individuals. Individuals that nested in more than 1 year had similar reproductive rates in their first and second years. Poor producers either died or dispersed after 1 year of nesting in study area boxes. Successful females that nested early in the season and successful males that had been produced locally had the highest probability of returning to nest in a subsequent year.     

Strong founder effects and low genetic diversity in introduced populations of Coqui frogs

The success of non-native species may depend on the genetic resources maintained through the invasion process. The Coqui ( Eleutherodactylus coqui ), a frog endemic to Puerto Rico, was introduced to Hawaii in the late 1980s via the horticulture trade, and has become an aggressive invader. To explore whether genetic diversity and population structure changed with the introduction, we assessed individuals from 15 populations across the Hawaiian Islands and 13 populations across Puerto Rico using six to nine polymorphic microsatellite loci and five dorsolateral colour patterns. Allelic richness ( R _T) and gene diversity were significantly higher in Puerto Rico than in Hawaii populations. Hawaii also had fewer colour patterns (two versus three to five per population) than Puerto Rico. We found no isolation by distance in the introduced range, even though it exists in the native range. Results suggest extensive mixing among frog populations across Hawaii, and that their spread has been facilitated by humans. Like previous research, our results suggest that Hawaiian Coquis were founded by individuals from sites around San Juan, but unlike previous research the colour pattern and molecular genetic data (nuclear and mtDNA) support two separate introductions, one on the island of Hawaii and one on Maui. Coquis are successful invaders in Hawaii despite the loss of genetic variation. Future introductions may increase genetic variation and potentially its range.     

Who's your daddy? Paternity testing reveals promiscuity and multiple paternity in the carnivorous marsupial Dasyurus maculatus (Marsupialia: Dasyuridae)

Female promiscuity is common among mammals but its advantages, particularly for marsupials, remain unclear. Using microsatellite DNA from pouch young of known mothers, we identified the most likely fathers of 25 wild spotted-tailed quolls ( Dasyurus maculatus ) from six litters. We aimed to determine whether young within the same litter had different fathers, and whether breeding success of males was associated with large body mass (consistent with inter-male competition) or scrotal width (consistent with sperm competition). We also explored the possible influence of promiscuity on relatedness within litters. Finally, we used data on paternity and relatedness to make inferences regarding movement and dispersal.
Four litters were sired by more than one male, and three males sired offspring in more than one litter. Known fathers had higher body mass, but not scrotal width, than males of unknown paternity status, suggesting that males may compete for access to females. Sires were less related to dams than expected by chance, and litters with multiple paternity had lower relatedness than litters sired by a single male.  © 2009 The Linnean Society of London, Biological Journal of the Linnean Society , 2009, 96 , 1–7.     

Indirect effects of introduced trout on Cascades frogs (Rana cascadae) via shared aquatic prey

1. The introduction of trout to montane lakes has negatively affected amphibian populations across the western United States. In northern California’s Klamath–Siskiyou Mountains, introduced trout have diminished the distribution and abundance of a native ranid frog, Rana (=Lithobates) cascadae. This is primarily thought to be the result of predation on frog larvae. However, if trout feed on larval aquatic insects that are available to R. cascadae only after emergence, then resource competition may also affect this declining native amphibian. 2. Stomach contents of R. cascadae were compared between lakes that contained trout and those from which introduced trout were removed. Total prey mass in stomach contents relative to frog body mass was not significantly different between lakes with fish and fish‐removal lakes, but in the former R. cascadae consumed a smaller proportion of adult aquatic insects. The stomach contents of fish included larvae of aquatic insects that are, as adults, eaten by R. cascadae. 3. Rana cascadae consumed fewer caddisflies (Trichoptera) and more grasshoppers (Orthoptera) at lakes with higher densities of fish. At lakes with greater aquatic habitat complexity, R. cascadae consumed more water striders (Hemiptera: Gerridae) and terrestrial spiders (Araneae). 4. We suggest that reductions in the availability of emerging aquatic insects cause R. cascadae to consume more terrestrial prey where trout are present. Thus, introduced trout may influence native amphibians directly through predation and, indirectly, through pre‐emptive resource competition.     

Coprolite morphotypes from the Upper Cretaceous of Sweden: novel views on an ancient ecosystem and implications for coprolite taphonomy

Eriksson, M.E., Lindgren, J., Chin, K. & Månsby, U. 2011: Coprolite morphotypes from the Upper Cretaceous of Sweden: novel views on an ancient ecosystem and implications for coprolite taphonomy. Lethaia, Vol. 44, pp. 455–468. Coprolites (fossilized faeces) are common, yet previously unreported, elements in the Campanian (Upper Cretaceous) shallow‐marine strata of Åsen, southern Sweden. They are associated with a diverse vertebrate fauna and comprise at least seven different morphotypes that suggest a variety of source animals. Their faecal origin is corroborated by several lines of evidence, including chemical composition (primarily calcium phosphate), external morphology and nature of the inclusions. Preservation in a fossil coquina, interpreted as a taphocoenosis, suggests early lithification promoted by rapid entombment. This would have prevented disintegration of the faecal matter and facilitated transportation and introduction to the host sediment. The coprofabrics can generally be correlated to specific gross morphologies, supporting a morphology‐determined coprolite classification. Moreover, having been deposited under presumably comparable taphonomic conditions, variations in coprofabrics infer differences in diet and/or digestive efficiency of the host animal. Size and morphology of the coprolites imply that most, if not all, were produced by vertebrates and the largest specimens infer a host animal of considerable size. Two spiralled coprolite morphotypes yield bone fragments and scales of bony fish, suggesting that the producers were piscivorous sharks. Other coprolites contain inclusions interpreted as the remains of shelled invertebrates, thus indicating that they may have derived from durophagous predators and/or scavengers. The occurrence of small scrapes, tracks and traces on several specimens suggest manipulation of the faeces by other (presumably coprophagous) organisms after deposition. The collective data from the Åsen coprolites provide new insights into a shallow‐water Late Cretaceous marine ecosystem hitherto known solely from body fossils. □ Coprolites, vertebrates, coprofabrics, taphonomy, trophic levels, Upper Cretaceous, Sweden.     

Ready and Waiting: Delayed Hatching and Extended Incubation of Anamniotic Vertebrate Terrestrial Eggs

Some anamniotic aquatic vertebrates lay eggs in a terrestrialhabitat that is hostile to the survival of hatchings or larvae.These terrestrial eggs are ready and able to hatch at a particulardevelopmental time, but do not hatch until presented with suitableconditions for aquatic larval survival. Beyond this time, hatchingis possible whenever aquatic conditions occur. The durationof extended terrestrial incubation is dependent on the availabilityof energy for metabolism from the yolk. Extended incubationis useful for anamniotic eggs laid in terrestrial habitats whereconditions suitable for larval survival arrive with unpredictableor variable timing. Examples of anamniotes with delayed hatchingand extended terrestrial incubation can be found among teleostfishes, anurans, and caudate amphibians. This paper characterizesthe embryonic period, compares this mode with other forms ofdevelopmental plasticity in anamniotes, evaluates the constraintsand advantages of this life history mode, and examines how somefishes and amphibians are able to obtain the benefits of terrestrialityfor their eggs when the timing of the return to aquatic conditionsis not entirely predictable.     

Autochthonous leaf assemblages as records of deciduous forest communities: an actualistic study

How well do autochthonous leaf assemblages reflect live plant communities? How do leaf assemblages accumulating over different time scales compare in paleoecologic information content? Forest-floor leaf assemblages accumulating over ten-day intervals (referred to here as short-term assemblages) and over a five-month season of leaf abscission (referred to here as a long-term assemblage) were compared with the surrounding community in a modern temperate deciduous forest in northern Ohio. Leaf number in the long-term leaf assemblage is strongly correlated with the abundance of taxa (stem number) around the accumulation site and weakly correlated with both average taxon size (stem circumference) and average taxon distance from the accumulation site. Of the variance in leaf number, 45% is explained solely by stem number and 67% by stem number and average distance together. Average size explains an insignificant amount of the variance in leaf number. Like the long-term assemblage, leaf number in the short-term leaf assemblages is usually strongly correlated with stem number and usually weakly correlated with average taxon size and average taxon distance. However, these patterns are not consistent, and the correlations are highly variable. Similarly, there is high variability in the degree to which stem number, average taxon size and average taxon distance account for variance in leaf number. Short-term leaf assemblages are characterized by great fluctuations in taxonomic relative abundance, caused by seasonal variation in the timing and rate of leaf abscission among taxa. While autochthonous leaf assemblages accumulating over several months can reflect the surrounding community with fair accuracy, leaf assemblages accumulating over shorter time spans are inconsistent records of the surrounding community. The depositional circumstances producing short-term assemblages (i.e. event burial) may result in well-preserved specimens, but community data from such assemblages should be treated with caution and, if possible, compared with data from contemporaneous long-term assemblages.Paleobotany, taphonomy, actualism, paleocommunity reconstruction, time-averaging. Keith H. Meldahl, Damon Scott and Karen Carney, Department of Geology, Oberlin College, Oberlin, Ohio, 44074, USA; 6th June, 1994; revised 8th February, 1995.